Browse of TCMCG057C23286 protein

CDS

Accession Number	TCMCG057C23286
gbkey	CDS
Protein Id	XP_018493038.1
Location	complement(join(5107376..5107417,5107507..5107593,5107675..5107749,5107876..5107992,5108075..5108155,5108622..5108687,5108842..5108907,5109082..5109153,5109240..5109341,5109432..5109609,5109680..5109735,5109985..5110092,5110176..5110244,5110335..5110443,5110644..5110732,5110846..5110923,5111636..5111758,5112051..5112170,5112272..5112352,5112425..5112571,5112664..5112742,5113178..5113252,5113531..5113640,5113758..5113856,5114164..5114279,5114394..5114502,5114594..5114812,5114909..5115174,5115513..5115670,5115760..5115916,5116053..5116116,5116408..5116437))
Gene	LOC108863198
GeneID	108863198
Organism	Raphanus sativus

Protein

Length	1115aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA344915
db_source	XM_018637536.1
Definition	PREDICTED: ubiquitin carboxyl-terminal hydrolase 13 isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category	O
Description	Belongs to the peptidase C19 family
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko01002        [VIEW IN KEGG] ko04121        [VIEW IN KEGG]
KEGG_ko	ko:K11838        [VIEW IN KEGG]
EC	3.4.19.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko04068        [VIEW IN KEGG] ko05168        [VIEW IN KEGG] ko05169        [VIEW IN KEGG] ko05203        [VIEW IN KEGG] map04068        [VIEW IN KEGG] map05168        [VIEW IN KEGG] map05169        [VIEW IN KEGG] map05203        [VIEW IN KEGG]
GOs	GO:0001101        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004843        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0005911        [VIEW IN EMBL-EBI] GO:0006508        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007154        [VIEW IN EMBL-EBI] GO:0007165        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008233        [VIEW IN EMBL-EBI] GO:0008234        [VIEW IN EMBL-EBI] GO:0009506        [VIEW IN EMBL-EBI] GO:0009719        [VIEW IN EMBL-EBI] GO:0009725        [VIEW IN EMBL-EBI] GO:0009753        [VIEW IN EMBL-EBI] GO:0009755        [VIEW IN EMBL-EBI] GO:0009867        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010033        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0019538        [VIEW IN EMBL-EBI] GO:0019783        [VIEW IN EMBL-EBI] GO:0023052        [VIEW IN EMBL-EBI] GO:0030054        [VIEW IN EMBL-EBI] GO:0032870        [VIEW IN EMBL-EBI] GO:0036459        [VIEW IN EMBL-EBI] GO:0042221        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0055044        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0070011        [VIEW IN EMBL-EBI] GO:0070887        [VIEW IN EMBL-EBI] GO:0071229        [VIEW IN EMBL-EBI] GO:0071310        [VIEW IN EMBL-EBI] GO:0071395        [VIEW IN EMBL-EBI] GO:0071495        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0101005        [VIEW IN EMBL-EBI] GO:0140096        [VIEW IN EMBL-EBI] GO:1901564        [VIEW IN EMBL-EBI] GO:1901700        [VIEW IN EMBL-EBI] GO:1901701        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGACTACGGTGACTCCACCGCCGCCTGATCAAGAGGACGAGGAAATGCTCGTTCCGCATTCTGATGTGGTCGAGGGACCCCAGCCTATGGAAGTTGCTCAACCTGAGGCTGCTGCCGCTGCTACCGCTGTGGAGAGTCCTCCTGTGGAGGAGCCTCCCACTATGAAGTTCACGTGGACTATCCCAGGTTTCACTAGGCTGAACACCAGGAAGCATTACTCTGATGTATTCGTTGTTGGAGGCCATAAATGGAGAGTATTGATTTTTCCCAAAGGAAACAATGTTGACCATTTGTCCATGTACTTGGATGTTGCTGACGCTGCGAGTTTGCCGTATGGGTGGAGCAGGTTTTCACAGTTCGGCCTGACTTTAGTGAATCAAATCAACAGCAGTTATTCCATCAGAAAAGAGACCCAACATCAATTCAATTCAAGAGAAAGCGACTGGGGGTTTACATCATTCATGCCTCTCAGCGAGCTTTACGATCCTACTCGTGGATATTTAGTGAATGATACTATTCTAATTGAAGCTGAAGTTGCTGTGCGGAAGGTTCTTGATTACTGGTCATATGACTCAAAAAAAGAGACTGGTTTTGTTGGACTAAAAAACCAAGGTGCTACCTGCTACATGAATTCTCTCCTGCAGACGTTATACCACATACCTTACTTTAGAAAGGCTGTTTACCACATGCCAACAACTGAGACTGATGCACCTACGGCGAGTATCCCATTGGCGCTCCAGAGTTTGTTTTATAAGCTTCAGTATAATGATACCAGTGTAGCTACAAAAGAGCTAACCAAGTCGTTTGGTTGGGATACATATGATTCATTCATGCAACATGATGTTCAAGAACTCAACCGAGTTCTCTGTGAAAAGCTTGAGGACAAAATGAAGGGAACTGTTGTGGAGGGAACTATACAGAAGTTATTCGAGGGTCACCACATGAATTACATTGAGTGCATCAATGTAGATTACAAATCTACACGTAAAGAATCATTCTATGACCTCCAGCTTGATGTTAAAGGCTGCAAAGATGTATATGATTCTTTTGACAAGTATGTTGAAGTTGAACGCCTTGAAGGTGACAACAAATACCATGCAGAAGGACATGATTTACAGGATGCAAAAAAAGGTGTTTTGTTTATAGACTTTCCACCCGTACTTCAACTTCAGCTCAAGAGGTTTGAATATGATTTTATGCGAGACACAATGGTGAAGATAAATGATCGATATGAGTTTCCTCTTGAACTGGATCTCGACAGAGATAATAGAAAGTATTTATCCCCTGATGCTGACAAGAGTGTCCGTAATCTATACACACTCCACAGTGTCTTAGTTCATAGTGGCGGAGTGCATGGAGGGCACTATTATGCTTTTATTAGGCCGACTCTCTCAGACCAGTGGTATAAATTTGATGATGAACGGGTGACTAAGGAAGATGTGAAAAGGGCTCTGGAAGAGCAATATGGTGGTGAGGAAGAGTTACCACAGAATAATCCTGGTTTAAATAACCCACCTTTTAAGTTCACAAAATACTCGAACGCATACATGCTTGTTTATATCCGGGAAAGTGACAAGGATAAAATAATCTGCAACGTTGATGAAAAGGACATTGCAGAACATTTACGGGTGAGACTAAAAAAAGAACAAGAAGAAAAGGAAGATAAAAGAAAATATAAGGCTCAAGCTCATCTTTTCACGACAATCAAGGTCTCAAGAGATGAAGACATCACTGAGCAAATTGGAAAGAATATATATTTTGATCTTGTTGATCATGAAAAAGTTAAGAGTTTCCGTATTCAGAAACAGACTCCCTTTCAACTATTTAAGGAGGAGGTGGCCAAAGAATTTGGTATCCCGGTTCAGCTCCAGCGGTTCTGGATTTGGGCAAAGCGGCAGAACCATACTTATCGGCTCAATCGTCCCCTATTATCTCACGAAGAATTACAGACGGTTGGACTTTTAAGAGAGGCATGTAACAAGGCAAACAATGCTGAACTAAAGCTGTTTCTGGAAATAGTGCGCGGACCGGACGAACGTCCTATTCCTCCCCCAGACAAGTCATCTGAAGATATTCTCCTTTTCTTTAAGCTCTATGACCCTGAGAATGCAGTTCTAAGATATGTCGGCAGGCTCATGGTGAAAAACTCCACTAAGCCGATGGATATAGTAGGGCAATTGAATCAAATGGCTGGCTTTCCTCCTGATGAGGAAATAGAACTTTTTGAGGAGATAAAGTTTGAACCCAATGTCATGTGCGAACATCTGGATAAGAAGACTTCTTTCAGACTATCTCAAATTGAAGATGGAGATATCATTTGCTTTCAGAAACCCCTTTCTATCCAGGAGAATGGATGTCCTTACCCGGATGTACCATCATTTTTGGAGTATGTACAGAATCGAGAGGTGGTGCGCTTTCGTACTCTGGAAAAACCAAAAGAAGATGAGTTTACTATGGAGTTGTCAAAGCGGCACACATATGATGTTGTTGTTGAAAGATTAGCTGAGAAGCTTGGCCTTGATGATCCATCGAAAATTAGGCTTACTTCTCACAATTGCTACTCCCAGCAACCCAAGCCCCAGCCTATCAAATACCGTGGAGTAGACCATCTTTCAGATATGTTAGCTCACTATAATCAGACGTCTGACATTTTGTATTATGAAGTTCTGGACATTCCTCTTCCAGAATTGCAAGGTCTTAAGACTCTAAAGGTAGCTTTCCATCATGCTACAAAGGACGAGGTGGTAATCCACAATATCAGGCTTCCTAAACAGAGTACTGTGGGAGATGTTATTAAGGAGCTTAAAACAAAGGTGGAGTTATCGCATCCTGATGCAGAACTGAGGTTGCTAGAGGTGTTTTTCCACAAGATTTACAAGATCTTTACATCTACGGAAAGAATTGAGAATATCAATGACCAGTACTGGACTTTACGAGCAGAGGAGATACCTGAGGAAGAGAAGAATATTGGTCCCGGTGATCGATTAGTCCATGTGTACCATTTTACTAAAGAACAAAACCAATCGCAAGTACAAAATTTCGGGGAGCCGTTCTTTCAGGTAATCCACGAAGGTGAAACTTTAGAAGAAATCAAGCCCCGTATCCAAAAGAAACTCCATGTACCTGATGAGGACTTCGCCAAGTGGAAGTTTGCTTCTTTCTCAATGGGACGTCCCGACTACTTGCAGGACACAGATATCGTTTATGATCGCTTTCAGAGAAGAGATGTATATGGTGCGTGGGAGCAGTATCTTGGGTTGGAGCACATTGATAATGCTCCTAAAAGGGCTTATGCTGCAAATCAGAATCGACACGCTTATGAGAAGCCGGTGAAAATATACAATTAG

Protein:   MTTVTPPPPDQEDEEMLVPHSDVVEGPQPMEVAQPEAAAAATAVESPPVEEPPTMKFTWTIPGFTRLNTRKHYSDVFVVGGHKWRVLIFPKGNNVDHLSMYLDVADAASLPYGWSRFSQFGLTLVNQINSSYSIRKETQHQFNSRESDWGFTSFMPLSELYDPTRGYLVNDTILIEAEVAVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTETDAPTASIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYDSFDKYVEVERLEGDNKYHAEGHDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRDNRKYLSPDADKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDVKRALEEQYGGEEELPQNNPGLNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRVRLKKEQEEKEDKRKYKAQAHLFTTIKVSRDEDITEQIGKNIYFDLVDHEKVKSFRIQKQTPFQLFKEEVAKEFGIPVQLQRFWIWAKRQNHTYRLNRPLLSHEELQTVGLLREACNKANNAELKLFLEIVRGPDERPIPPPDKSSEDILLFFKLYDPENAVLRYVGRLMVKNSTKPMDIVGQLNQMAGFPPDEEIELFEEIKFEPNVMCEHLDKKTSFRLSQIEDGDIICFQKPLSIQENGCPYPDVPSFLEYVQNREVVRFRTLEKPKEDEFTMELSKRHTYDVVVERLAEKLGLDDPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLAHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEVVIHNIRLPKQSTVGDVIKELKTKVELSHPDAELRLLEVFFHKIYKIFTSTERIENINDQYWTLRAEEIPEEEKNIGPGDRLVHVYHFTKEQNQSQVQNFGEPFFQVIHEGETLEEIKPRIQKKLHVPDEDFAKWKFASFSMGRPDYLQDTDIVYDRFQRRDVYGAWEQYLGLEHIDNAPKRAYAANQNRHAYEKPVKIYN